BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C04LP1|AL429184
(1007 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1303 1878 0.0
>3x_Contig1303
Length = 8112
Score = 1878 bits (944), Expect = 0.0
Identities = 970/978 (99%), Gaps = 2/978 (0%)
Strand = Plus / Minus
Query: 11 ccttatagctaactactttgttaacaagcttttagccatcaacaaagagtagtgatatag 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1796 ccttatagctaactactttgttaacaagcttttagccatcaacaaagagtagtgatatag 1737
Query: 71 ggctgttctttgtttgagctattgaattttcctatagtgagtgagtttttcttgttgaaa 130
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1736 ggctgttctttgtttgagctattgaattttcctatagtgagtgagtgtttcttgttgaaa 1677
Query: 131 agaaaaggtgcaagaaatacttccaaacacaggttttaagcttgttgtggtttttattta 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1676 agaaaaggtgcaagaaatacttccaaacacaggttttaagcttgttgtggtttttattta 1617
Query: 191 caagaacgctaatcataatcactttacaagaaattcagaaggaatttatcccaatttttt 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1616 caagaacgctaatcataatcactttacaagaaattcagaaggaatttatcccaatttttt 1557
Query: 251 cacaggtaaggactgggttttattataattattattttttttattgacctttgaacttta 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 cacaggtaaggactgggttttattataattattattttttttattgacctttgaacttta 1497
Query: 311 tcttcccttgtaaaggttaatttgccattgcataagttcatctatctatagagcgttttg 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1496 tcttcccttgtaaaggttaatttgccattgcataagttcatctatctatagagcgttttg 1437
Query: 371 tctccggagtgctaaaatatcacaatgtcagataatgggccagatttgtggcttgagaag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1436 tctccggagtgctaaaatatcacaatgtcagataatgggccagatttgtggcttgagaag 1377
Query: 431 atcaagaaatgtcaggctttgacggagtctgagatgaaacagctatgcgagatgatgaag 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 atcaagaaatgtcaggctttgacggagtctgagatgaaacagctatgcgagatgatgaag 1317
Query: 491 gaactcttaatggaagaatcgaatattcagccggttcaatcgccggtgactgtttgtggt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 gaactcttaatggaagaatcgaatattcagccggttcaatcgccggtgactgtttgtggt 1257
Query: 551 gatattcacggacaatttcatgaccttttagaactattcagaactgctggtgggtttcct 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 gatattcacggacaatttcatgaccttttagaactattcagaactgctggtgggtttcct 1197
Query: 611 gatcaagttaactatatttttcttggtgactatgtagatcgtggttattacagtttggag 670
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 gatcaagtaaactatatttttcttggtgactatgtagatcgtggttattacagtttggag 1137
Query: 671 acgttcacacttcttatgtgtttgaaagtgaaatatccttccagaattactttggttaga 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 acgttcacacttcttatgtgtttgaaagtgaaatatccttccagaattactttggttaga 1077
Query: 731 ggaaatcatgagttgaggcaaattacacaagtttatgggttttatgaggaatgtttaaat 790
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 ggaaatcatgagtcgaggcaaattacacaagtttatgggttttatgaggaatgtttaaat 1017
Query: 791 aagtatggttccacaacggtttggaagtattgttgtcaagtgtttgatttcttaactttg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 aagtatggttccacaacggtttggaagtattgttgtcaagtgtttgatttcttaactttg 957
Query: 851 gcagctattattgacgggaaaattttatgtgtkcatggtggtttgtctcccgagattaga 910
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 956 gcagctattattgacgggaaaattttatgtgtgcatggtggtttgtctcccgagattaga 897
Query: 911 atgcttgatcagatcagagttctatcgagagcscmagaag-tcctcatgaaggtggc-tc 968
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| ||
Sbjct: 896 atgcttgatcagatcagagttctatcgagagcccaagaagttcctcatgaaggtggcttc 837
Query: 969 tccgatttgttatggagt 986
||||||||||||||||||
Sbjct: 836 tccgatttgttatggagt 819
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8816
Number of Sequences: 1807
Number of extensions: 8816
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 1007
length of database: 10,358,551
effective HSP length: 16
effective length of query: 991
effective length of database: 10,329,639
effective search space: 10236672249
effective search space used: 10236672249
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)